hdmf_common_sparse#
- pydantic model ConfiguredBaseModel#
Bases:
BaseModel
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
__init__ uses __pydantic_self__ instead of the more common self for the first arg to allow self as a field name.
- Config:
validate_assignment: bool = True
validate_default: bool = True
extra: str = forbid
arbitrary_types_allowed: bool = True
use_enum_values: bool = True
- Fields:
- pydantic model LinkML_Meta#
Bases:
BaseModel
Extra LinkML Metadata stored as a class attribute
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
__init__ uses __pydantic_self__ instead of the more common self for the first arg to allow self as a field name.
- Fields:
- pydantic model CSRMatrix#
Bases:
ConfiguredBaseModel
a compressed sparse row matrix
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
__init__ uses __pydantic_self__ instead of the more common self for the first arg to allow self as a field name.
- Config:
validate_assignment: bool = True
validate_default: bool = True
extra: str = forbid
arbitrary_types_allowed: bool = True
use_enum_values: bool = True
- Fields:
- field data: CSRMatrixData [Required]#
values in the matrix
- field indices: CSRMatrixIndices [Required]#
column indices
- field indptr: CSRMatrixIndptr [Required]#
index pointer
- linkml_meta: ClassVar[LinkML_Meta] = FieldInfo(annotation=NoneType, required=False, default=LinkML_Meta(tree_root=True), frozen=True)#
- pydantic model CSRMatrixIndices#
Bases:
ConfiguredBaseModel
column indices
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
__init__ uses __pydantic_self__ instead of the more common self for the first arg to allow self as a field name.
- Config:
validate_assignment: bool = True
validate_default: bool = True
extra: str = forbid
arbitrary_types_allowed: bool = True
use_enum_values: bool = True
- Fields:
- field name: Literal['indices'] = 'indices'#
- linkml_meta: ClassVar[LinkML_Meta] = FieldInfo(annotation=NoneType, required=False, default=LinkML_Meta(tree_root=False), frozen=True)#
- pydantic model CSRMatrixIndptr#
Bases:
ConfiguredBaseModel
index pointer
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
__init__ uses __pydantic_self__ instead of the more common self for the first arg to allow self as a field name.
- Config:
validate_assignment: bool = True
validate_default: bool = True
extra: str = forbid
arbitrary_types_allowed: bool = True
use_enum_values: bool = True
- Fields:
- field name: Literal['indptr'] = 'indptr'#
- linkml_meta: ClassVar[LinkML_Meta] = FieldInfo(annotation=NoneType, required=False, default=LinkML_Meta(tree_root=False), frozen=True)#
- pydantic model CSRMatrixData#
Bases:
ConfiguredBaseModel
values in the matrix
Create a new model by parsing and validating input data from keyword arguments.
Raises [ValidationError][pydantic_core.ValidationError] if the input data cannot be validated to form a valid model.
__init__ uses __pydantic_self__ instead of the more common self for the first arg to allow self as a field name.
- Config:
validate_assignment: bool = True
validate_default: bool = True
extra: str = forbid
arbitrary_types_allowed: bool = True
use_enum_values: bool = True
- Fields:
- field name: Literal['data'] = 'data'#
- linkml_meta: ClassVar[LinkML_Meta] = FieldInfo(annotation=NoneType, required=False, default=LinkML_Meta(tree_root=False), frozen=True)#